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Automatic Design of Tiling Array Probes on Genome


Tiling array probes can be automatically designed.


  • The probe lenght can be changed. And the interval between one probe and the following probe also can be changed.
  • The strand can be specified, like as "Forward Strand", "Reverse Strand" or "Both".
  • The probes can be designed avoiding user-specified feature regions such as "rRNA",
  • If there are annotation in the region of designed probe, the annotation information can be incorporated into the probe description.
  • The probe name can be designed to include user-specifed prefix and sequential number with the user-specified digit number.

    • Currently, three types of output format can be selected.
    • More formats will be incorporated soon.


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